Package: progenyClust 1.2
progenyClust: Finding the Optimal Cluster Number Using Progeny Clustering
Implementing the Progeny Clustering algorithm, the 'progenyClust' package assesses the clustering stability and identifies the optimal clustering number for a given data matrix. It uses k-means clustering as a default, provides a tailored hierarchical clustering function, and can be customized to work with other clustering algorithms and different parameter settings. The package includes a main function progenyClust(), plot and summary methods for 'progenyClust' object, a function hclust.progenyClust() for hierarchical clustering, and two example datasets (test and cell) for testing.
Authors:
progenyClust_1.2.tar.gz
progenyClust_1.2.zip(r-4.5)progenyClust_1.2.zip(r-4.4)progenyClust_1.2.zip(r-4.3)
progenyClust_1.2.tgz(r-4.4-any)progenyClust_1.2.tgz(r-4.3-any)
progenyClust_1.2.tar.gz(r-4.5-noble)progenyClust_1.2.tar.gz(r-4.4-noble)
progenyClust_1.2.tgz(r-4.4-emscripten)progenyClust_1.2.tgz(r-4.3-emscripten)
progenyClust.pdf |progenyClust.html✨
progenyClust/json (API)
# Install 'progenyClust' in R: |
install.packages('progenyClust', repos = c('https://huhuhuyeye.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 9 years agofrom:21aa39e1a0. Checks:OK: 7. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 23 2024 |
R-4.5-win | OK | Nov 23 2024 |
R-4.5-linux | OK | Nov 23 2024 |
R-4.4-win | OK | Nov 23 2024 |
R-4.4-mac | OK | Nov 23 2024 |
R-4.3-win | OK | Nov 23 2024 |
R-4.3-mac | OK | Nov 23 2024 |
Exports:hclust.progenyClustprogenyClust
Dependencies:backportsbase64encbslibcachemcheckmatecliclustercolorspacedata.tabledigestevaluatefansifarverfastmapfontawesomeforeignFormulafsggplot2gluegridExtragtablehighrHmischtmlTablehtmltoolshtmlwidgetsisobandjquerylibjsonliteknitrlabelinglatticelifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnlmennetpillarpkgconfigR6rappdirsRColorBrewerrlangrmarkdownrpartrstudioapisassscalesstringistringrtibbletinytexutf8vctrsviridisviridisLitewithrxfunyaml
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Finding the Optimal Cluster Number Using Progeny Clustering | progenyClust-package |
cell imaging metrics dataset | cell |
Hierarchical Clustering | hclust.progenyClust |
Plot Progeny Clustering Results | plot.progenyClust |
Progeny Clustering | print.summary.progenyClust progenyClust summary.progenyClust |
3-cluster 2-dimensional test dataset | test |